Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Gm14822-201ENSMUST00000122247 291 ntBASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Gm43125-201ENSMUST00000201724 730 ntBASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Gm9824-201ENSMUST00000178707 561 ntBASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.87□□□□□ -0.03
Ssr1Q9CY50 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.87□□□□□ -0.03
Ssr1Q9CY50 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr1Q9CY50 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ssr1Q9CY50 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Gm13015-201ENSMUST00000118674 204 ntBASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 AA543401-201ENSMUST00000164248 1269 ntBASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Gm44335-201ENSMUST00000196879 141 ntBASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Gm44297-201ENSMUST00000198304 141 ntBASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Gm44346-201ENSMUST00000198851 141 ntBASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ssr1Q9CY50 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssr1Q9CY50 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms