Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Otud1Q9CUB6 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Otud1Q9CUB6 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Otud1Q9CUB6 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Otud1Q9CUB6 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Otud1Q9CUB6 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Otud1Q9CUB6 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.94□□□□□ -0.34
Otud1Q9CUB6 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Otud1Q9CUB6 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Otud1Q9CUB6 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Otud1Q9CUB6 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.94□□□□□ -0.34
Otud1Q9CUB6 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.94□□□□□ -0.34
Otud1Q9CUB6 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.94□□□□□ -0.34
Otud1Q9CUB6 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Otud1Q9CUB6 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Otud1Q9CUB6 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Otud1Q9CUB6 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Otud1Q9CUB6 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Otud1Q9CUB6 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Otud1Q9CUB6 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Otud1Q9CUB6 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Otud1Q9CUB6 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Otud1Q9CUB6 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Otud1Q9CUB6 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Otud1Q9CUB6 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Otud1Q9CUB6 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Gm11478-201ENSMUST00000117851 599 ntBASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.92□□□□□ -0.34
Otud1Q9CUB6 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.92□□□□□ -0.34
Otud1Q9CUB6 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms