Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Gm12350-201ENSMUST00000121208 462 ntBASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.31□□□□□ -0.44
Krt88Q9CPR6 AA619741-201ENSMUST00000195095 646 ntBASIC12.31□□□□□ -0.44
Krt88Q9CPR6 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt88Q9CPR6 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Rpph1-201ENSMUST00000175096 319 ntBASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Krt88Q9CPR6 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms