Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Gm6912-201ENSMUST00000117218 544 ntBASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Gm25925-201ENSMUST00000158314 306 ntBASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.09
Trim11Q99PQ2 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim11Q99PQ2 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim11Q99PQ2 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.58■□□□□ 0.09
Trim11Q99PQ2 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.58■□□□□ 0.09
Trim11Q99PQ2 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.58■□□□□ 0.09
Trim11Q99PQ2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim11Q99PQ2 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.58■□□□□ 0.08
Trim11Q99PQ2 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim11Q99PQ2 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim11Q99PQ2 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.58■□□□□ 0.08
Trim11Q99PQ2 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim11Q99PQ2 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trim11Q99PQ2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim11Q99PQ2 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.58■□□□□ 0.08
Trim11Q99PQ2 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim11Q99PQ2 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trim11Q99PQ2 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim11Q99PQ2 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim11Q99PQ2 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim11Q99PQ2 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim11Q99PQ2 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim11Q99PQ2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim11Q99PQ2 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim11Q99PQ2 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim11Q99PQ2 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim11Q99PQ2 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim11Q99PQ2 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trim11Q99PQ2 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim11Q99PQ2 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim11Q99PQ2 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim11Q99PQ2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.57■□□□□ 0.08
Trim11Q99PQ2 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.57■□□□□ 0.08
Trim11Q99PQ2 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trim11Q99PQ2 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15.57■□□□□ 0.08
Trim11Q99PQ2 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim11Q99PQ2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trim11Q99PQ2 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim11Q99PQ2 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim11Q99PQ2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim11Q99PQ2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.57■□□□□ 0.08
Trim11Q99PQ2 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.57■□□□□ 0.08
Trim11Q99PQ2 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim11Q99PQ2 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim11Q99PQ2 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim11Q99PQ2 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim11Q99PQ2 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim11Q99PQ2 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trim11Q99PQ2 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Gm13223-201ENSMUST00000118609 747 ntBASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms