Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim33Q99PP7 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim33Q99PP7 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim33Q99PP7 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim33Q99PP7 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trim33Q99PP7 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.61□□□□□ -0.23
Trim33Q99PP7 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim33Q99PP7 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Trim33Q99PP7 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim33Q99PP7 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trim33Q99PP7 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim33Q99PP7 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim33Q99PP7 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim33Q99PP7 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Gm14057-201ENSMUST00000120631 482 ntBASIC13.6□□□□□ -0.23
Trim33Q99PP7 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.6□□□□□ -0.23
Trim33Q99PP7 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.6□□□□□ -0.23
Trim33Q99PP7 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim33Q99PP7 BC043934-202ENSMUST00000185694 2356 ntBASIC13.6□□□□□ -0.23
Trim33Q99PP7 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Gm43339-201ENSMUST00000200032 1606 ntBASIC13.6□□□□□ -0.23
Trim33Q99PP7 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Trim33Q99PP7 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim33Q99PP7 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim33Q99PP7 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim33Q99PP7 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim33Q99PP7 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim33Q99PP7 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim33Q99PP7 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim33Q99PP7 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim33Q99PP7 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim33Q99PP7 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim33Q99PP7 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim33Q99PP7 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.59□□□□□ -0.23
Trim33Q99PP7 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim33Q99PP7 Gm14719-201ENSMUST00000121891 340 ntBASIC13.59□□□□□ -0.23
Trim33Q99PP7 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.59□□□□□ -0.23
Trim33Q99PP7 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim33Q99PP7 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim33Q99PP7 Gm18558-201ENSMUST00000186253 1214 ntBASIC13.59□□□□□ -0.23
Trim33Q99PP7 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim33Q99PP7 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim33Q99PP7 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.59□□□□□ -0.23
Trim33Q99PP7 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.59□□□□□ -0.23
Trim33Q99PP7 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.59□□□□□ -0.23
Trim33Q99PP7 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.59□□□□□ -0.23
Trim33Q99PP7 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim33Q99PP7 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim33Q99PP7 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Trim33Q99PP7 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim33Q99PP7 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim33Q99PP7 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim33Q99PP7 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim33Q99PP7 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.58□□□□□ -0.23
Trim33Q99PP7 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.23
Trim33Q99PP7 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim33Q99PP7 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim33Q99PP7 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.58□□□□□ -0.23
Trim33Q99PP7 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim33Q99PP7 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim33Q99PP7 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim33Q99PP7 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim33Q99PP7 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim33Q99PP7 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim33Q99PP7 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim33Q99PP7 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim33Q99PP7 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim33Q99PP7 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms