Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Gm45219-201ENSMUST00000205602 465 ntBASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Gm45433-201ENSMUST00000209386 247 ntBASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Spcs1-203ENSMUST00000226374 592 ntBASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Ntng1-201ENSMUST00000051253 327 ntBASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdh15Q99PJ1 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdh15Q99PJ1 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdh15Q99PJ1 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdh15Q99PJ1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Pcdh15Q99PJ1 Gm13408-201ENSMUST00000119822 798 ntBASIC15.08■□□□□ 0
Pcdh15Q99PJ1 Gm11597-201ENSMUST00000121423 964 ntBASIC15.08■□□□□ 0
Pcdh15Q99PJ1 Gm13935-201ENSMUST00000121859 798 ntBASIC15.08■□□□□ 0
Pcdh15Q99PJ1 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.08■□□□□ 0
Pcdh15Q99PJ1 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC15.08■□□□□ 0
Pcdh15Q99PJ1 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC15.08■□□□□ 0
Pcdh15Q99PJ1 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC15.08■□□□□ 0
Pcdh15Q99PJ1 Gm10752-201ENSMUST00000218348 729 ntBASIC15.08■□□□□ 0
Pcdh15Q99PJ1 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC15.08■□□□□ 0
Pcdh15Q99PJ1 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh15Q99PJ1 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdh15Q99PJ1 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh15Q99PJ1 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh15Q99PJ1 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.08■□□□□ 0
Pcdh15Q99PJ1 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh15Q99PJ1 Gm43273-201ENSMUST00000199649 2594 ntBASIC15.08■□□□□ 0
Pcdh15Q99PJ1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh15Q99PJ1 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh15Q99PJ1 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Pcdh15Q99PJ1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh15Q99PJ1 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh15Q99PJ1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh15Q99PJ1 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh15Q99PJ1 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh15Q99PJ1 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC15.08■□□□□ 0
Pcdh15Q99PJ1 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh15Q99PJ1 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh15Q99PJ1 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdh15Q99PJ1 Gm9211-201ENSMUST00000182882 975 ntBASIC15.07■□□□□ 0
Pcdh15Q99PJ1 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC15.07■□□□□ 0
Pcdh15Q99PJ1 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh15Q99PJ1 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh15Q99PJ1 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh15Q99PJ1 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdh15Q99PJ1 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh15Q99PJ1 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.07■□□□□ 0
Pcdh15Q99PJ1 Gm9279-201ENSMUST00000223175 1606 ntBASIC15.07■□□□□ 0
Pcdh15Q99PJ1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh15Q99PJ1 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Pcdh15Q99PJ1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh15Q99PJ1 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh15Q99PJ1 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdh15Q99PJ1 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC15.07■□□□□ 0
Pcdh15Q99PJ1 AC125486.1-201ENSMUST00000218701 320 ntBASIC15.07■□□□□ 0
Pcdh15Q99PJ1 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh15Q99PJ1 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh15Q99PJ1 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh15Q99PJ1 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdh15Q99PJ1 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.07■□□□□ 0
Pcdh15Q99PJ1 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.07■□□□□ 0
Pcdh15Q99PJ1 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.07■□□□□ 0
Pcdh15Q99PJ1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh15Q99PJ1 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Pcdh15Q99PJ1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh15Q99PJ1 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh15Q99PJ1 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdh15Q99PJ1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh15Q99PJ1 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh15Q99PJ1 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdh15Q99PJ1 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC15.06■□□□□ 0
Pcdh15Q99PJ1 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh15Q99PJ1 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC15.06■□□□□ 0
Pcdh15Q99PJ1 Gzmn-202ENSMUST00000225535 989 ntBASIC15.06■□□□□ 0
Pcdh15Q99PJ1 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh15Q99PJ1 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh15Q99PJ1 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Pcdh15Q99PJ1 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh15Q99PJ1 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh15Q99PJ1 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh15Q99PJ1 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdh15Q99PJ1 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms