Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Gm17795-201ENSMUST00000214505 757 ntBASIC14.69□□□□□ -0.06
Tlr3Q99MB1 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.69□□□□□ -0.06
Tlr3Q99MB1 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tlr3Q99MB1 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tlr3Q99MB1 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.69□□□□□ -0.06
Tlr3Q99MB1 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Tlr3Q99MB1 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tlr3Q99MB1 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tlr3Q99MB1 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tlr3Q99MB1 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.69□□□□□ -0.06
Tlr3Q99MB1 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tlr3Q99MB1 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tlr3Q99MB1 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tlr3Q99MB1 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Tlr3Q99MB1 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.69□□□□□ -0.06
Tlr3Q99MB1 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tlr3Q99MB1 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Tlr3Q99MB1 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tlr3Q99MB1 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tlr3Q99MB1 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tlr3Q99MB1 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tlr3Q99MB1 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tlr3Q99MB1 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tlr3Q99MB1 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tlr3Q99MB1 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.68□□□□□ -0.06
Tlr3Q99MB1 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tlr3Q99MB1 Gm11478-201ENSMUST00000117851 599 ntBASIC14.68□□□□□ -0.06
Tlr3Q99MB1 Gm21854-201ENSMUST00000179901 471 ntBASIC14.68□□□□□ -0.06
Tlr3Q99MB1 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tlr3Q99MB1 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.68□□□□□ -0.06
Tlr3Q99MB1 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Tlr3Q99MB1 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tlr3Q99MB1 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Tlr3Q99MB1 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tlr3Q99MB1 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Tlr3Q99MB1 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tlr3Q99MB1 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Tlr3Q99MB1 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tlr3Q99MB1 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tlr3Q99MB1 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tlr3Q99MB1 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tlr3Q99MB1 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tlr3Q99MB1 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tlr3Q99MB1 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Tlr3Q99MB1 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tlr3Q99MB1 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tlr3Q99MB1 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Tlr3Q99MB1 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tlr3Q99MB1 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tlr3Q99MB1 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.66□□□□□ -0.06
Tlr3Q99MB1 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tlr3Q99MB1 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tlr3Q99MB1 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tlr3Q99MB1 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tlr3Q99MB1 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
Tlr3Q99MB1 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tlr3Q99MB1 Gm23984-201ENSMUST00000157139 203 ntBASIC14.66□□□□□ -0.06
Tlr3Q99MB1 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.66□□□□□ -0.06
Tlr3Q99MB1 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.66□□□□□ -0.06
Tlr3Q99MB1 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Tlr3Q99MB1 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.66□□□□□ -0.06
Tlr3Q99MB1 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.66□□□□□ -0.06
Tlr3Q99MB1 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tlr3Q99MB1 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tlr3Q99MB1 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tlr3Q99MB1 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tlr3Q99MB1 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Tlr3Q99MB1 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tlr3Q99MB1 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms