Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scrt1Q99M85 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.98□□□□□ -0.49
Scrt1Q99M85 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scrt1Q99M85 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scrt1Q99M85 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scrt1Q99M85 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scrt1Q99M85 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scrt1Q99M85 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scrt1Q99M85 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scrt1Q99M85 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scrt1Q99M85 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Scrt1Q99M85 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Scrt1Q99M85 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scrt1Q99M85 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Scrt1Q99M85 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Scrt1Q99M85 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.98□□□□□ -0.49
Scrt1Q99M85 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.98□□□□□ -0.49
Scrt1Q99M85 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.98□□□□□ -0.49
Scrt1Q99M85 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scrt1Q99M85 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scrt1Q99M85 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.98□□□□□ -0.49
Scrt1Q99M85 Gm7287-201ENSMUST00000205267 602 ntBASIC11.98□□□□□ -0.49
Scrt1Q99M85 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Scrt1Q99M85 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scrt1Q99M85 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scrt1Q99M85 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scrt1Q99M85 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scrt1Q99M85 Gm7399-201ENSMUST00000032395 858 ntBASIC11.98□□□□□ -0.49
Scrt1Q99M85 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Scrt1Q99M85 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scrt1Q99M85 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Scrt1Q99M85 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scrt1Q99M85 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scrt1Q99M85 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scrt1Q99M85 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.98□□□□□ -0.49
Scrt1Q99M85 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scrt1Q99M85 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scrt1Q99M85 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Scrt1Q99M85 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.97□□□□□ -0.49
Scrt1Q99M85 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.97□□□□□ -0.49
Scrt1Q99M85 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Gm5187-201ENSMUST00000117317 991 ntBASIC11.97□□□□□ -0.49
Scrt1Q99M85 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.97□□□□□ -0.49
Scrt1Q99M85 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.97□□□□□ -0.49
Scrt1Q99M85 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Gm10275-202ENSMUST00000168697 495 ntBASIC11.97□□□□□ -0.49
Scrt1Q99M85 Gm29649-201ENSMUST00000185649 419 ntBASIC11.97□□□□□ -0.49
Scrt1Q99M85 Gm29127-201ENSMUST00000188304 517 ntBASIC11.97□□□□□ -0.49
Scrt1Q99M85 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Gm43094-201ENSMUST00000196549 921 ntBASIC11.97□□□□□ -0.49
Scrt1Q99M85 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.97□□□□□ -0.49
Scrt1Q99M85 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Gm10275-201ENSMUST00000092620 635 ntBASIC11.97□□□□□ -0.49
Scrt1Q99M85 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Scrt1Q99M85 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scrt1Q99M85 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms