Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Gm2991-201ENSMUST00000173338 480 ntBASIC14.34□□□□□ -0.11
Clp1Q99LI9 Gm27320-201ENSMUST00000184892 109 ntBASIC14.34□□□□□ -0.11
Clp1Q99LI9 Gm44069-201ENSMUST00000204898 506 ntBASIC14.34□□□□□ -0.11
Clp1Q99LI9 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clp1Q99LI9 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.34□□□□□ -0.11
Clp1Q99LI9 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clp1Q99LI9 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.34□□□□□ -0.11
Clp1Q99LI9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clp1Q99LI9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clp1Q99LI9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clp1Q99LI9 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
Clp1Q99LI9 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.33□□□□□ -0.11
Clp1Q99LI9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Clp1Q99LI9 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clp1Q99LI9 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Clp1Q99LI9 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Clp1Q99LI9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Clp1Q99LI9 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clp1Q99LI9 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clp1Q99LI9 Gm15370-201ENSMUST00000117158 253 ntBASIC14.33□□□□□ -0.12
Clp1Q99LI9 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.33□□□□□ -0.12
Clp1Q99LI9 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Clp1Q99LI9 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.33□□□□□ -0.12
Clp1Q99LI9 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.33□□□□□ -0.12
Clp1Q99LI9 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.33□□□□□ -0.12
Clp1Q99LI9 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clp1Q99LI9 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Clp1Q99LI9 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clp1Q99LI9 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Clp1Q99LI9 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clp1Q99LI9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clp1Q99LI9 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.33□□□□□ -0.12
Clp1Q99LI9 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.33□□□□□ -0.12
Clp1Q99LI9 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clp1Q99LI9 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clp1Q99LI9 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.33□□□□□ -0.12
Clp1Q99LI9 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.33□□□□□ -0.12
Clp1Q99LI9 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clp1Q99LI9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clp1Q99LI9 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clp1Q99LI9 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clp1Q99LI9 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clp1Q99LI9 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Clp1Q99LI9 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clp1Q99LI9 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clp1Q99LI9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Clp1Q99LI9 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.32□□□□□ -0.12
Clp1Q99LI9 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clp1Q99LI9 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clp1Q99LI9 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Clp1Q99LI9 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Clp1Q99LI9 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clp1Q99LI9 Gm6023-201ENSMUST00000118217 606 ntBASIC14.32□□□□□ -0.12
Clp1Q99LI9 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clp1Q99LI9 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clp1Q99LI9 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clp1Q99LI9 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Clp1Q99LI9 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clp1Q99LI9 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clp1Q99LI9 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clp1Q99LI9 Gm21769-201ENSMUST00000211922 111 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms