Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Gm12485-201ENSMUST00000119641 291 ntBASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.5□□□□□ -0.25
Clcc1Q99LI2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Gm26464-201ENSMUST00000157094 305 ntBASIC13.49□□□□□ -0.25
Clcc1Q99LI2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Gm2495-201ENSMUST00000191160 466 ntBASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clcc1Q99LI2 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.49□□□□□ -0.25
Clcc1Q99LI2 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clcc1Q99LI2 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Clcc1Q99LI2 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.48□□□□□ -0.25
Clcc1Q99LI2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clcc1Q99LI2 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Clcc1Q99LI2 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Clcc1Q99LI2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clcc1Q99LI2 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.48□□□□□ -0.25
Clcc1Q99LI2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Clcc1Q99LI2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Clcc1Q99LI2 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clcc1Q99LI2 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.48□□□□□ -0.25
Clcc1Q99LI2 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clcc1Q99LI2 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.48□□□□□ -0.25
Clcc1Q99LI2 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Clcc1Q99LI2 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clcc1Q99LI2 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clcc1Q99LI2 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clcc1Q99LI2 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clcc1Q99LI2 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clcc1Q99LI2 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clcc1Q99LI2 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Clcc1Q99LI2 Gm2445-201ENSMUST00000182798 989 ntBASIC13.48□□□□□ -0.25
Clcc1Q99LI2 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clcc1Q99LI2 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clcc1Q99LI2 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms