Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC16.77■□□□□ 0.28
RtcbQ99LF4 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RtcbQ99LF4 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC16.77■□□□□ 0.28
RtcbQ99LF4 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RtcbQ99LF4 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RtcbQ99LF4 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RtcbQ99LF4 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RtcbQ99LF4 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RtcbQ99LF4 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RtcbQ99LF4 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RtcbQ99LF4 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RtcbQ99LF4 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RtcbQ99LF4 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RtcbQ99LF4 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.77■□□□□ 0.27
RtcbQ99LF4 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RtcbQ99LF4 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RtcbQ99LF4 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RtcbQ99LF4 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RtcbQ99LF4 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RtcbQ99LF4 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.76■□□□□ 0.27
RtcbQ99LF4 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Gm16479-201ENSMUST00000121706 932 ntBASIC16.76■□□□□ 0.27
RtcbQ99LF4 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RtcbQ99LF4 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC16.76■□□□□ 0.27
RtcbQ99LF4 AC122371.3-201ENSMUST00000223402 1061 ntBASIC16.76■□□□□ 0.27
RtcbQ99LF4 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.76■□□□□ 0.27
RtcbQ99LF4 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
RtcbQ99LF4 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RtcbQ99LF4 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RtcbQ99LF4 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RtcbQ99LF4 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RtcbQ99LF4 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.75■□□□□ 0.27
RtcbQ99LF4 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.75■□□□□ 0.27
RtcbQ99LF4 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RtcbQ99LF4 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RtcbQ99LF4 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RtcbQ99LF4 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC16.75■□□□□ 0.27
RtcbQ99LF4 Gm11637-201ENSMUST00000120601 592 ntBASIC16.75■□□□□ 0.27
RtcbQ99LF4 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RtcbQ99LF4 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC16.75■□□□□ 0.27
RtcbQ99LF4 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC16.75■□□□□ 0.27
RtcbQ99LF4 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RtcbQ99LF4 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC16.75■□□□□ 0.27
RtcbQ99LF4 Gm19163-201ENSMUST00000223313 780 ntBASIC16.75■□□□□ 0.27
RtcbQ99LF4 Morn2-202ENSMUST00000227729 656 ntBASIC16.75■□□□□ 0.27
RtcbQ99LF4 CT025533.2-201ENSMUST00000228715 1248 ntBASIC16.75■□□□□ 0.27
RtcbQ99LF4 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RtcbQ99LF4 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RtcbQ99LF4 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RtcbQ99LF4 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RtcbQ99LF4 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
RtcbQ99LF4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.75■□□□□ 0.27
RtcbQ99LF4 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RtcbQ99LF4 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RtcbQ99LF4 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RtcbQ99LF4 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RtcbQ99LF4 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RtcbQ99LF4 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RtcbQ99LF4 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms