Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.48□□□□□ -0.41
Lims1Q99JW4 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lims1Q99JW4 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lims1Q99JW4 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Gm24543-201ENSMUST00000103867 82 ntBASIC12.47□□□□□ -0.41
Lims1Q99JW4 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Gm15460-201ENSMUST00000118147 391 ntBASIC12.47□□□□□ -0.41
Lims1Q99JW4 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.47□□□□□ -0.41
Lims1Q99JW4 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Gm8927-201ENSMUST00000181978 981 ntBASIC12.47□□□□□ -0.41
Lims1Q99JW4 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Gm28630-201ENSMUST00000187806 498 ntBASIC12.47□□□□□ -0.41
Lims1Q99JW4 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.47□□□□□ -0.41
Lims1Q99JW4 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Gm3222-201ENSMUST00000071282 990 ntBASIC12.47□□□□□ -0.41
Lims1Q99JW4 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lims1Q99JW4 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Lims1Q99JW4 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lims1Q99JW4 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lims1Q99JW4 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lims1Q99JW4 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lims1Q99JW4 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lims1Q99JW4 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Lims1Q99JW4 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lims1Q99JW4 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Lims1Q99JW4 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lims1Q99JW4 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lims1Q99JW4 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.46□□□□□ -0.41
Lims1Q99JW4 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.46□□□□□ -0.41
Lims1Q99JW4 Gm24158-201ENSMUST00000175263 71 ntBASIC12.46□□□□□ -0.41
Lims1Q99JW4 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lims1Q99JW4 Gm21470-201ENSMUST00000187680 696 ntBASIC12.46□□□□□ -0.41
Lims1Q99JW4 Gm37444-201ENSMUST00000193605 439 ntBASIC12.46□□□□□ -0.41
Lims1Q99JW4 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Lims1Q99JW4 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Lims1Q99JW4 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.46□□□□□ -0.41
Lims1Q99JW4 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lims1Q99JW4 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lims1Q99JW4 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lims1Q99JW4 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lims1Q99JW4 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Lims1Q99JW4 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lims1Q99JW4 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Lims1Q99JW4 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.46□□□□□ -0.42
Lims1Q99JW4 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Lims1Q99JW4 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lims1Q99JW4 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lims1Q99JW4 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lims1Q99JW4 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.42
Lims1Q99JW4 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lims1Q99JW4 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lims1Q99JW4 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lims1Q99JW4 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.46□□□□□ -0.42
Lims1Q99JW4 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Lims1Q99JW4 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.46□□□□□ -0.42
Lims1Q99JW4 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Gm15693-201ENSMUST00000120470 637 ntBASIC12.45□□□□□ -0.42
Lims1Q99JW4 Gm13385-201ENSMUST00000121089 220 ntBASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms