Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col20a1Q923P0 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col20a1Q923P0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col20a1Q923P0 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col20a1Q923P0 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col20a1Q923P0 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Col20a1Q923P0 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col20a1Q923P0 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col20a1Q923P0 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col20a1Q923P0 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Col20a1Q923P0 Gm14660-201ENSMUST00000119809 575 ntBASIC16.09■□□□□ 0.17
Col20a1Q923P0 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col20a1Q923P0 Snora78-201ENSMUST00000158630 128 ntBASIC16.09■□□□□ 0.17
Col20a1Q923P0 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Col20a1Q923P0 Gm8810-201ENSMUST00000172895 754 ntBASIC16.09■□□□□ 0.17
Col20a1Q923P0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col20a1Q923P0 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC16.09■□□□□ 0.17
Col20a1Q923P0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col20a1Q923P0 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Col20a1Q923P0 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col20a1Q923P0 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.09■□□□□ 0.17
Col20a1Q923P0 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col20a1Q923P0 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Col20a1Q923P0 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.08■□□□□ 0.17
Col20a1Q923P0 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col20a1Q923P0 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col20a1Q923P0 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col20a1Q923P0 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col20a1Q923P0 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col20a1Q923P0 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col20a1Q923P0 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col20a1Q923P0 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC16.08■□□□□ 0.16
Col20a1Q923P0 Gm22331-201ENSMUST00000158066 136 ntBASIC16.08■□□□□ 0.16
Col20a1Q923P0 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
Col20a1Q923P0 Gm9299-201ENSMUST00000206392 1140 ntBASIC16.08■□□□□ 0.16
Col20a1Q923P0 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.08■□□□□ 0.16
Col20a1Q923P0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col20a1Q923P0 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Col20a1Q923P0 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Col20a1Q923P0 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col20a1Q923P0 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col20a1Q923P0 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Col20a1Q923P0 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col20a1Q923P0 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col20a1Q923P0 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col20a1Q923P0 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col20a1Q923P0 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col20a1Q923P0 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col20a1Q923P0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col20a1Q923P0 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col20a1Q923P0 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Col20a1Q923P0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col20a1Q923P0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Gm27731-201ENSMUST00000185192 107 ntBASIC16.07■□□□□ 0.16
Col20a1Q923P0 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col20a1Q923P0 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC16.07■□□□□ 0.16
Col20a1Q923P0 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC16.07■□□□□ 0.16
Col20a1Q923P0 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC16.07■□□□□ 0.16
Col20a1Q923P0 AC122459.1-201ENSMUST00000228373 885 ntBASIC16.07■□□□□ 0.16
Col20a1Q923P0 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Gm9899-201ENSMUST00000065519 555 ntBASIC16.07■□□□□ 0.16
Col20a1Q923P0 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col20a1Q923P0 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col20a1Q923P0 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.06■□□□□ 0.16
Col20a1Q923P0 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col20a1Q923P0 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Col20a1Q923P0 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col20a1Q923P0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col20a1Q923P0 AC131068.2-201ENSMUST00000226175 1453 ntBASIC16.06■□□□□ 0.16
Col20a1Q923P0 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col20a1Q923P0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col20a1Q923P0 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms