Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc1bQ920F6 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smc1bQ920F6 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smc1bQ920F6 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC15.78■□□□□ 0.12
Smc1bQ920F6 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.78■□□□□ 0.12
Smc1bQ920F6 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc1bQ920F6 Gm27731-201ENSMUST00000185192 107 ntBASIC15.78■□□□□ 0.12
Smc1bQ920F6 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.78■□□□□ 0.12
Smc1bQ920F6 AC154806.6-201ENSMUST00000228192 202 ntBASIC15.78■□□□□ 0.12
Smc1bQ920F6 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.78■□□□□ 0.12
Smc1bQ920F6 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc1bQ920F6 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc1bQ920F6 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Smc1bQ920F6 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.78■□□□□ 0.12
Smc1bQ920F6 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smc1bQ920F6 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.78■□□□□ 0.12
Smc1bQ920F6 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc1bQ920F6 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc1bQ920F6 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.78■□□□□ 0.12
Smc1bQ920F6 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc1bQ920F6 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc1bQ920F6 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smc1bQ920F6 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Smc1bQ920F6 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.77■□□□□ 0.12
Smc1bQ920F6 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smc1bQ920F6 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smc1bQ920F6 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smc1bQ920F6 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smc1bQ920F6 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
Smc1bQ920F6 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smc1bQ920F6 Gm11814-201ENSMUST00000119515 929 ntBASIC15.77■□□□□ 0.12
Smc1bQ920F6 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.77■□□□□ 0.12
Smc1bQ920F6 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC15.77■□□□□ 0.12
Smc1bQ920F6 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Smc1bQ920F6 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.77■□□□□ 0.12
Smc1bQ920F6 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smc1bQ920F6 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Smc1bQ920F6 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smc1bQ920F6 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smc1bQ920F6 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.77■□□□□ 0.11
Smc1bQ920F6 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smc1bQ920F6 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smc1bQ920F6 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Smc1bQ920F6 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smc1bQ920F6 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.77■□□□□ 0.11
Smc1bQ920F6 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smc1bQ920F6 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Smc1bQ920F6 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Smc1bQ920F6 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Smc1bQ920F6 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Gm9726-201ENSMUST00000180321 678 ntBASIC15.76■□□□□ 0.11
Smc1bQ920F6 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.76■□□□□ 0.11
Smc1bQ920F6 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc1bQ920F6 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.76■□□□□ 0.11
Smc1bQ920F6 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc1bQ920F6 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.76■□□□□ 0.11
Smc1bQ920F6 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc1bQ920F6 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc1bQ920F6 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.75■□□□□ 0.11
Smc1bQ920F6 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc1bQ920F6 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
Smc1bQ920F6 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.75■□□□□ 0.11
Smc1bQ920F6 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc1bQ920F6 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc1bQ920F6 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.75■□□□□ 0.11
Smc1bQ920F6 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc1bQ920F6 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc1bQ920F6 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc1bQ920F6 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Smc1bQ920F6 Gm4804-201ENSMUST00000182234 999 ntBASIC15.75■□□□□ 0.11
Smc1bQ920F6 Gm21470-201ENSMUST00000187680 696 ntBASIC15.75■□□□□ 0.11
Smc1bQ920F6 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc1bQ920F6 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms