Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pcdha3Q91Y16 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Gm6218-201ENSMUST00000219812 628 ntBASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha3Q91Y16 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha3Q91Y16 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha3Q91Y16 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.27□□□□□ -0.12
Pcdha3Q91Y16 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.27□□□□□ -0.12
Pcdha3Q91Y16 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha3Q91Y16 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Pcdha3Q91Y16 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha3Q91Y16 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha3Q91Y16 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Pcdha3Q91Y16 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Pcdha3Q91Y16 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha3Q91Y16 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha3Q91Y16 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha3Q91Y16 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms