Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Gm12585-201ENSMUST00000117307 290 ntBASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Gm13223-201ENSMUST00000118609 747 ntBASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb8Q91XZ2 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Gm8927-201ENSMUST00000181978 981 ntBASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Gm10766-202ENSMUST00000194123 606 ntBASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Gm3222-201ENSMUST00000071282 990 ntBASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb8Q91XZ2 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb8Q91XZ2 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb8Q91XZ2 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Pcdhb8Q91XZ2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb8Q91XZ2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb8Q91XZ2 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb8Q91XZ2 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb8Q91XZ2 Gm13385-201ENSMUST00000121089 220 ntBASIC13.36□□□□□ -0.27
Pcdhb8Q91XZ2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.36□□□□□ -0.27
Pcdhb8Q91XZ2 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdhb8Q91XZ2 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Pcdhb8Q91XZ2 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb8Q91XZ2 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Pcdhb8Q91XZ2 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb8Q91XZ2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb8Q91XZ2 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdhb8Q91XZ2 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb8Q91XZ2 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb8Q91XZ2 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb8Q91XZ2 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.36□□□□□ -0.27
Pcdhb8Q91XZ2 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb8Q91XZ2 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhb8Q91XZ2 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Pcdhb8Q91XZ2 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb8Q91XZ2 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms