Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim60Q8VI40 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim60Q8VI40 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim60Q8VI40 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim60Q8VI40 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trim60Q8VI40 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim60Q8VI40 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim60Q8VI40 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim60Q8VI40 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim60Q8VI40 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trim60Q8VI40 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.14□□□□□ -0.15
Trim60Q8VI40 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim60Q8VI40 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim60Q8VI40 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim60Q8VI40 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim60Q8VI40 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim60Q8VI40 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim60Q8VI40 Gm15460-201ENSMUST00000118147 391 ntBASIC14.14□□□□□ -0.15
Trim60Q8VI40 Gm21470-201ENSMUST00000187680 696 ntBASIC14.14□□□□□ -0.15
Trim60Q8VI40 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim60Q8VI40 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.14□□□□□ -0.15
Trim60Q8VI40 Gm5425-201ENSMUST00000214125 459 ntBASIC14.14□□□□□ -0.15
Trim60Q8VI40 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.14□□□□□ -0.15
Trim60Q8VI40 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim60Q8VI40 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim60Q8VI40 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim60Q8VI40 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim60Q8VI40 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trim60Q8VI40 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim60Q8VI40 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim60Q8VI40 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim60Q8VI40 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim60Q8VI40 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim60Q8VI40 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim60Q8VI40 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim60Q8VI40 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim60Q8VI40 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim60Q8VI40 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim60Q8VI40 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim60Q8VI40 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Gm4804-201ENSMUST00000182234 999 ntBASIC14.13□□□□□ -0.15
Trim60Q8VI40 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Grk6-205ENSMUST00000224653 2976 ntBASIC14.13□□□□□ -0.15
Trim60Q8VI40 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim60Q8VI40 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.13□□□□□ -0.15
Trim60Q8VI40 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.13□□□□□ -0.15
Trim60Q8VI40 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim60Q8VI40 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Trim60Q8VI40 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim60Q8VI40 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Trim60Q8VI40 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim60Q8VI40 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim60Q8VI40 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim60Q8VI40 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim60Q8VI40 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim60Q8VI40 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trim60Q8VI40 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim60Q8VI40 Gm12428-201ENSMUST00000119844 727 ntBASIC14.12□□□□□ -0.15
Trim60Q8VI40 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim60Q8VI40 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim60Q8VI40 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.12□□□□□ -0.15
Trim60Q8VI40 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.12□□□□□ -0.15
Trim60Q8VI40 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.12□□□□□ -0.15
Trim60Q8VI40 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.12□□□□□ -0.15
Trim60Q8VI40 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim60Q8VI40 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Trim60Q8VI40 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim60Q8VI40 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim60Q8VI40 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim60Q8VI40 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.12□□□□□ -0.15
Trim60Q8VI40 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim60Q8VI40 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
Trim60Q8VI40 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim60Q8VI40 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms