Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.33□□□□□ -0.28
Q8VDP2 Gm37600-201ENSMUST00000193764 3292 ntBASIC13.33□□□□□ -0.28
Q8VDP2 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Q8VDP2 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
Q8VDP2 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Q8VDP2 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Q8VDP2 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Q8VDP2 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Q8VDP2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.32□□□□□ -0.28
Q8VDP2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Q8VDP2 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Q8VDP2 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Q8VDP2 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Q8VDP2 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Q8VDP2 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Q8VDP2 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Q8VDP2 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Q8VDP2 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Q8VDP2 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Q8VDP2 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Q8VDP2 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Q8VDP2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Q8VDP2 Gm15372-201ENSMUST00000120729 834 ntBASIC13.32□□□□□ -0.28
Q8VDP2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.32□□□□□ -0.28
Q8VDP2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.32□□□□□ -0.28
Q8VDP2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.32□□□□□ -0.28
Q8VDP2 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.32□□□□□ -0.28
Q8VDP2 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.32□□□□□ -0.28
Q8VDP2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Q8VDP2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Q8VDP2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Q8VDP2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Q8VDP2 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Q8VDP2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Q8VDP2 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Q8VDP2 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Q8VDP2 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Q8VDP2 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Q8VDP2 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Q8VDP2 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Q8VDP2 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q8VDP2 AC166359.1-201ENSMUST00000220243 1871 ntBASIC13.31□□□□□ -0.28
Q8VDP2 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q8VDP2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.31□□□□□ -0.28
Q8VDP2 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q8VDP2 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q8VDP2 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Q8VDP2 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q8VDP2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
Q8VDP2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Q8VDP2 Gm8584-201ENSMUST00000171982 758 ntBASIC13.31□□□□□ -0.28
Q8VDP2 Gm27459-201ENSMUST00000184860 107 ntBASIC13.31□□□□□ -0.28
Q8VDP2 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.31□□□□□ -0.28
Q8VDP2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q8VDP2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q8VDP2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Q8VDP2 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q8VDP2 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Q8VDP2 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q8VDP2 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Q8VDP2 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.31□□□□□ -0.28
Q8VDP2 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q8VDP2 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Q8VDP2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Q8VDP2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q8VDP2 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q8VDP2 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Q8VDP2 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q8VDP2 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q8VDP2 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q8VDP2 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Q8VDP2 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q8VDP2 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q8VDP2 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Q8VDP2 Gm5124-202ENSMUST00000132683 2083 ntBASIC13.3□□□□□ -0.28
Q8VDP2 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Q8VDP2 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q8VDP2 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Q8VDP2 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.3□□□□□ -0.28
Q8VDP2 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q8VDP2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Q8VDP2 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Q8VDP2 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Q8VDP2 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Q8VDP2 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q8VDP2 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q8VDP2 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.3□□□□□ -0.28
Q8VDP2 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q8VDP2 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q8VDP2 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Q8VDP2 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Q8VDP2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Q8VDP2 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q8VDP2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.3□□□□□ -0.28
Q8VDP2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.3□□□□□ -0.28
Q8VDP2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Q8VDP2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q8VDP2 Gm44771-201ENSMUST00000206975 626 ntBASIC13.3□□□□□ -0.28
Q8VDP2 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q8VDP2 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms