Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Gm46209-201ENSMUST00000217912 553 ntBASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Gm13385-201ENSMUST00000121089 220 ntBASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Gm25144-201ENSMUST00000179561 110 ntBASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Gm25352-201ENSMUST00000179815 110 ntBASIC13.12□□□□□ -0.31
Lsm1Q8VC85 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm1Q8VC85 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Lsm1Q8VC85 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm1Q8VC85 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm1Q8VC85 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm1Q8VC85 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.11□□□□□ -0.31
Lsm1Q8VC85 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm1Q8VC85 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Lsm1Q8VC85 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Lsm1Q8VC85 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.11□□□□□ -0.31
Lsm1Q8VC85 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Lsm1Q8VC85 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm1Q8VC85 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm1Q8VC85 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm1Q8VC85 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm1Q8VC85 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.11□□□□□ -0.31
Lsm1Q8VC85 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm1Q8VC85 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Lsm1Q8VC85 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Lsm1Q8VC85 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm1Q8VC85 Gm2213-201ENSMUST00000197485 688 ntBASIC13.11□□□□□ -0.31
Lsm1Q8VC85 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm1Q8VC85 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm1Q8VC85 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms