Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf8Q8VC56 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.21□□□□□ -0.29
Rnf8Q8VC56 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf8Q8VC56 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf8Q8VC56 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf8Q8VC56 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf8Q8VC56 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf8Q8VC56 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf8Q8VC56 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rnf8Q8VC56 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf8Q8VC56 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Rnf8Q8VC56 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf8Q8VC56 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf8Q8VC56 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf8Q8VC56 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf8Q8VC56 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf8Q8VC56 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf8Q8VC56 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.21□□□□□ -0.29
Rnf8Q8VC56 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf8Q8VC56 Gm25925-201ENSMUST00000158314 306 ntBASIC13.21□□□□□ -0.29
Rnf8Q8VC56 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.21□□□□□ -0.29
Rnf8Q8VC56 Gm29541-201ENSMUST00000191351 678 ntBASIC13.21□□□□□ -0.29
Rnf8Q8VC56 AA619741-201ENSMUST00000195095 646 ntBASIC13.21□□□□□ -0.29
Rnf8Q8VC56 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.21□□□□□ -0.29
Rnf8Q8VC56 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf8Q8VC56 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf8Q8VC56 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.21□□□□□ -0.29
Rnf8Q8VC56 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf8Q8VC56 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Rnf8Q8VC56 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Rnf8Q8VC56 Grk6-205ENSMUST00000224653 2976 ntBASIC13.21□□□□□ -0.29
Rnf8Q8VC56 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf8Q8VC56 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf8Q8VC56 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf8Q8VC56 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Rnf8Q8VC56 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Rnf8Q8VC56 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Rnf8Q8VC56 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf8Q8VC56 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf8Q8VC56 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf8Q8VC56 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf8Q8VC56 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf8Q8VC56 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Rnf8Q8VC56 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf8Q8VC56 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf8Q8VC56 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf8Q8VC56 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf8Q8VC56 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.2□□□□□ -0.3
Rnf8Q8VC56 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Gm27622-201ENSMUST00000183779 60 ntBASIC13.2□□□□□ -0.3
Rnf8Q8VC56 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf8Q8VC56 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms