Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Rpap2Q8VC34 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Rpap2Q8VC34 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpap2Q8VC34 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rpap2Q8VC34 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rpap2Q8VC34 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rpap2Q8VC34 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Gm11524-201ENSMUST00000119349 807 ntBASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Gm17330-201ENSMUST00000221047 165 ntBASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Gm5161-201ENSMUST00000075243 853 ntBASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rpap2Q8VC34 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Gm12485-201ENSMUST00000119641 291 ntBASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.98□□□□□ -0.01
Rpap2Q8VC34 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpap2Q8VC34 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpap2Q8VC34 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rpap2Q8VC34 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpap2Q8VC34 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpap2Q8VC34 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.97□□□□□ -0.01
Rpap2Q8VC34 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpap2Q8VC34 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpap2Q8VC34 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.97□□□□□ -0.01
Rpap2Q8VC34 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpap2Q8VC34 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms