Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Vps39Q8R5L3 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.71□□□□□ -0.22
Vps39Q8R5L3 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps39Q8R5L3 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps39Q8R5L3 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps39Q8R5L3 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
Vps39Q8R5L3 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps39Q8R5L3 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps39Q8R5L3 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps39Q8R5L3 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Vps39Q8R5L3 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps39Q8R5L3 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.7□□□□□ -0.22
Vps39Q8R5L3 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.7□□□□□ -0.22
Vps39Q8R5L3 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps39Q8R5L3 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.7□□□□□ -0.22
Vps39Q8R5L3 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps39Q8R5L3 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps39Q8R5L3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps39Q8R5L3 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.7□□□□□ -0.22
Vps39Q8R5L3 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.7□□□□□ -0.22
Vps39Q8R5L3 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps39Q8R5L3 Gm14701-201ENSMUST00000117156 348 ntBASIC13.7□□□□□ -0.22
Vps39Q8R5L3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Vps39Q8R5L3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.7□□□□□ -0.22
Vps39Q8R5L3 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.7□□□□□ -0.22
Vps39Q8R5L3 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.7□□□□□ -0.22
Vps39Q8R5L3 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.7□□□□□ -0.22
Vps39Q8R5L3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.7□□□□□ -0.22
Vps39Q8R5L3 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps39Q8R5L3 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps39Q8R5L3 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps39Q8R5L3 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Gm8927-201ENSMUST00000181978 981 ntBASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Gm3222-201ENSMUST00000071282 990 ntBASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps39Q8R5L3 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Gm12585-201ENSMUST00000117307 290 ntBASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Gm25948-201ENSMUST00000175334 112 ntBASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Gm3436-201ENSMUST00000179930 840 ntBASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms