Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Gm6222-201ENSMUST00000120787 396 ntBASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Gm37714-201ENSMUST00000194742 342 ntBASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.14□□□□□ -0.63
Nup35Q8R4R6 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Gm2651-201ENSMUST00000203560 838 ntBASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup35Q8R4R6 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms