Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd109Q8R422 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cd109Q8R422 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cd109Q8R422 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cd109Q8R422 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd109Q8R422 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Cd109Q8R422 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd109Q8R422 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cd109Q8R422 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd109Q8R422 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cd109Q8R422 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Cd109Q8R422 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd109Q8R422 Gm13342-201ENSMUST00000121055 207 ntBASIC19.18■□□□□ 0.66
Cd109Q8R422 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cd109Q8R422 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cd109Q8R422 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd109Q8R422 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cd109Q8R422 Gm3890-201ENSMUST00000182416 207 ntBASIC19.18■□□□□ 0.66
Cd109Q8R422 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC19.18■□□□□ 0.66
Cd109Q8R422 Gm18935-201ENSMUST00000212692 664 ntBASIC19.18■□□□□ 0.66
Cd109Q8R422 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd109Q8R422 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cd109Q8R422 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd109Q8R422 Gm38049-201ENSMUST00000195698 1372 ntBASIC19.18■□□□□ 0.66
Cd109Q8R422 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC19.18■□□□□ 0.66
Cd109Q8R422 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC19.18■□□□□ 0.66
Cd109Q8R422 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Cd109Q8R422 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd109Q8R422 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cd109Q8R422 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd109Q8R422 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cd109Q8R422 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd109Q8R422 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd109Q8R422 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd109Q8R422 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd109Q8R422 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd109Q8R422 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cd109Q8R422 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd109Q8R422 Gm38241-201ENSMUST00000192641 898 ntBASIC19.17■□□□□ 0.66
Cd109Q8R422 Gm6334-201ENSMUST00000207083 228 ntBASIC19.17■□□□□ 0.66
Cd109Q8R422 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC19.17■□□□□ 0.66
Cd109Q8R422 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd109Q8R422 Gm8793-201ENSMUST00000183069 1303 ntBASIC19.17■□□□□ 0.66
Cd109Q8R422 Gm43579-201ENSMUST00000202387 1307 ntBASIC19.17■□□□□ 0.66
Cd109Q8R422 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd109Q8R422 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cd109Q8R422 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd109Q8R422 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cd109Q8R422 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd109Q8R422 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Cd109Q8R422 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC19.17■□□□□ 0.66
Cd109Q8R422 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd109Q8R422 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Cd109Q8R422 Gm6023-201ENSMUST00000118217 606 ntBASIC19.17■□□□□ 0.66
Cd109Q8R422 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd109Q8R422 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cd109Q8R422 Gm37259-201ENSMUST00000193903 849 ntBASIC19.17■□□□□ 0.66
Cd109Q8R422 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cd109Q8R422 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC19.17■□□□□ 0.66
Cd109Q8R422 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd109Q8R422 Gm24526-201ENSMUST00000082921 158 ntBASIC19.17■□□□□ 0.66
Cd109Q8R422 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd109Q8R422 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd109Q8R422 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC19.16■□□□□ 0.66
Cd109Q8R422 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cd109Q8R422 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cd109Q8R422 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd109Q8R422 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cd109Q8R422 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cd109Q8R422 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd109Q8R422 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cd109Q8R422 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cd109Q8R422 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd109Q8R422 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd109Q8R422 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC19.16■□□□□ 0.66
Cd109Q8R422 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC19.16■□□□□ 0.66
Cd109Q8R422 Gm38341-201ENSMUST00000195357 515 ntBASIC19.16■□□□□ 0.66
Cd109Q8R422 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC19.16■□□□□ 0.66
Cd109Q8R422 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
Cd109Q8R422 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd109Q8R422 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd109Q8R422 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd109Q8R422 Ap5m1-205ENSMUST00000227431 3757 ntBASIC19.15■□□□□ 0.66
Cd109Q8R422 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd109Q8R422 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cd109Q8R422 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd109Q8R422 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd109Q8R422 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd109Q8R422 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cd109Q8R422 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd109Q8R422 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd109Q8R422 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd109Q8R422 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd109Q8R422 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd109Q8R422 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd109Q8R422 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC19.15■□□□□ 0.66
Cd109Q8R422 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cd109Q8R422 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd109Q8R422 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cd109Q8R422 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms