Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Gm10819-201ENSMUST00000099988 561 ntBASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Gm38225-201ENSMUST00000194001 393 ntBASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Nudcd3Q8R1N4 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Nudcd3Q8R1N4 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Nudcd3Q8R1N4 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Gm6222-201ENSMUST00000120787 396 ntBASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Gm11025-201ENSMUST00000140773 466 ntBASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Gm9727-201ENSMUST00000161387 555 ntBASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd3Q8R1N4 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms