Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atf7Q8R0S1 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atf7Q8R0S1 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atf7Q8R0S1 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Atf7Q8R0S1 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Atf7Q8R0S1 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Gm6198-201ENSMUST00000191337 2929 ntBASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Gm10327-201ENSMUST00000105222 1002 ntBASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Gm15321-201ENSMUST00000121290 288 ntBASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf7Q8R0S1 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Atf7Q8R0S1 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC16.11■□□□□ 0.17
Atf7Q8R0S1 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atf7Q8R0S1 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Atf7Q8R0S1 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atf7Q8R0S1 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atf7Q8R0S1 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atf7Q8R0S1 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Atf7Q8R0S1 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Atf7Q8R0S1 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Atf7Q8R0S1 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Atf7Q8R0S1 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Atf7Q8R0S1 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.11■□□□□ 0.17
Atf7Q8R0S1 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Atf7Q8R0S1 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Atf7Q8R0S1 Gm9797-201ENSMUST00000052902 613 ntBASIC16.11■□□□□ 0.17
Atf7Q8R0S1 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Atf7Q8R0S1 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.11■□□□□ 0.17
Atf7Q8R0S1 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atf7Q8R0S1 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Atf7Q8R0S1 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms