Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Gm15957-201ENSMUST00000118893 974 ntBASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf4Q8K4J2 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf4Q8K4J2 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Gm7153-201ENSMUST00000117092 455 ntBASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms