Protein–RNA interactions for Protein: Q8K3P5

Cnot6, CCR4-NOT transcription complex subunit 6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot6Q8K3P5 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cnot6Q8K3P5 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cnot6Q8K3P5 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Cnot6Q8K3P5 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cnot6Q8K3P5 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Gm29541-201ENSMUST00000191351 678 ntBASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Gm18049-201ENSMUST00000208909 581 ntBASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cnot6Q8K3P5 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot6Q8K3P5 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot6Q8K3P5 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot6Q8K3P5 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot6Q8K3P5 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot6Q8K3P5 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot6Q8K3P5 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot6Q8K3P5 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Cnot6Q8K3P5 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cnot6Q8K3P5 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot6Q8K3P5 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot6Q8K3P5 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot6Q8K3P5 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot6Q8K3P5 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot6Q8K3P5 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot6Q8K3P5 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.4□□□□□ -0.26
Cnot6Q8K3P5 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot6Q8K3P5 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot6Q8K3P5 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot6Q8K3P5 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot6Q8K3P5 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot6Q8K3P5 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.4□□□□□ -0.26
Cnot6Q8K3P5 Gm9824-201ENSMUST00000178707 561 ntBASIC13.4□□□□□ -0.26
Cnot6Q8K3P5 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cnot6Q8K3P5 Gm2445-201ENSMUST00000182798 989 ntBASIC13.4□□□□□ -0.26
Cnot6Q8K3P5 Gm29310-201ENSMUST00000185468 696 ntBASIC13.4□□□□□ -0.26
Cnot6Q8K3P5 Gm21825-201ENSMUST00000185728 696 ntBASIC13.4□□□□□ -0.26
Cnot6Q8K3P5 Gm29109-201ENSMUST00000185895 696 ntBASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms