Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC16.07■□□□□ 0.16
Shtn1Q8K2Q9 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Shtn1Q8K2Q9 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shtn1Q8K2Q9 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shtn1Q8K2Q9 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shtn1Q8K2Q9 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Shtn1Q8K2Q9 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shtn1Q8K2Q9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Shtn1Q8K2Q9 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.07■□□□□ 0.16
Shtn1Q8K2Q9 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shtn1Q8K2Q9 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shtn1Q8K2Q9 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shtn1Q8K2Q9 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Shtn1Q8K2Q9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Shtn1Q8K2Q9 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 Gm6203-201ENSMUST00000209575 1342 ntBASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 Gm22323-201ENSMUST00000103832 109 ntBASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 Gm11658-201ENSMUST00000120913 1008 ntBASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 Gm25927-201ENSMUST00000175058 117 ntBASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 Gm2467-201ENSMUST00000182266 1010 ntBASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 Gm6981-201ENSMUST00000182467 1008 ntBASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 Mir7070-201ENSMUST00000183657 86 ntBASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 Gm42627-201ENSMUST00000197347 224 ntBASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Shtn1Q8K2Q9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 Gm11400-201ENSMUST00000120853 1214 ntBASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 Gm12749-201ENSMUST00000122138 1159 ntBASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 Gm38158-201ENSMUST00000194617 339 ntBASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 Gm10608-202ENSMUST00000213924 676 ntBASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shtn1Q8K2Q9 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Gm17376-201ENSMUST00000166016 84 ntBASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Gm9176-201ENSMUST00000219955 1120 ntBASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms