Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CopaQ8CIE6 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CopaQ8CIE6 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.97□□□□□ -0.17
CopaQ8CIE6 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopaQ8CIE6 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Gm10766-202ENSMUST00000194123 606 ntBASIC13.97□□□□□ -0.17
CopaQ8CIE6 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Gm9797-201ENSMUST00000052902 613 ntBASIC13.97□□□□□ -0.17
CopaQ8CIE6 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.97□□□□□ -0.17
CopaQ8CIE6 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.97□□□□□ -0.17
CopaQ8CIE6 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.97□□□□□ -0.17
CopaQ8CIE6 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CopaQ8CIE6 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.96□□□□□ -0.17
CopaQ8CIE6 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CopaQ8CIE6 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CopaQ8CIE6 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CopaQ8CIE6 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
CopaQ8CIE6 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CopaQ8CIE6 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CopaQ8CIE6 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CopaQ8CIE6 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CopaQ8CIE6 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CopaQ8CIE6 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CopaQ8CIE6 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CopaQ8CIE6 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CopaQ8CIE6 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
CopaQ8CIE6 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.96□□□□□ -0.17
CopaQ8CIE6 Gm12585-201ENSMUST00000117307 290 ntBASIC13.96□□□□□ -0.17
CopaQ8CIE6 Gm15460-201ENSMUST00000118147 391 ntBASIC13.96□□□□□ -0.17
CopaQ8CIE6 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.96□□□□□ -0.17
CopaQ8CIE6 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CopaQ8CIE6 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.96□□□□□ -0.17
CopaQ8CIE6 Gm6180-201ENSMUST00000065243 498 ntBASIC13.96□□□□□ -0.17
CopaQ8CIE6 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CopaQ8CIE6 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CopaQ8CIE6 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CopaQ8CIE6 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CopaQ8CIE6 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CopaQ8CIE6 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CopaQ8CIE6 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CopaQ8CIE6 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CopaQ8CIE6 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
CopaQ8CIE6 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CopaQ8CIE6 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CopaQ8CIE6 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CopaQ8CIE6 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CopaQ8CIE6 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CopaQ8CIE6 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
CopaQ8CIE6 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CopaQ8CIE6 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CopaQ8CIE6 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CopaQ8CIE6 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CopaQ8CIE6 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CopaQ8CIE6 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CopaQ8CIE6 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CopaQ8CIE6 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CopaQ8CIE6 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CopaQ8CIE6 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.95□□□□□ -0.18
CopaQ8CIE6 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CopaQ8CIE6 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CopaQ8CIE6 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.95□□□□□ -0.18
CopaQ8CIE6 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.95□□□□□ -0.18
CopaQ8CIE6 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.95□□□□□ -0.18
CopaQ8CIE6 Gm23984-201ENSMUST00000157139 203 ntBASIC13.95□□□□□ -0.18
CopaQ8CIE6 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CopaQ8CIE6 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CopaQ8CIE6 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.95□□□□□ -0.18
CopaQ8CIE6 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms