Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clip4Q8CI96 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip4Q8CI96 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clip4Q8CI96 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip4Q8CI96 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip4Q8CI96 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip4Q8CI96 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Clip4Q8CI96 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip4Q8CI96 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Clip4Q8CI96 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clip4Q8CI96 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.8□□□□□ -0.2
Clip4Q8CI96 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.8□□□□□ -0.2
Clip4Q8CI96 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.8□□□□□ -0.2
Clip4Q8CI96 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip4Q8CI96 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Clip4Q8CI96 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.8□□□□□ -0.2
Clip4Q8CI96 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip4Q8CI96 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip4Q8CI96 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Clip4Q8CI96 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip4Q8CI96 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip4Q8CI96 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip4Q8CI96 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip4Q8CI96 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip4Q8CI96 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip4Q8CI96 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip4Q8CI96 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip4Q8CI96 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Clip4Q8CI96 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip4Q8CI96 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.79□□□□□ -0.2
Clip4Q8CI96 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.79□□□□□ -0.2
Clip4Q8CI96 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.79□□□□□ -0.2
Clip4Q8CI96 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.79□□□□□ -0.2
Clip4Q8CI96 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Clip4Q8CI96 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.79□□□□□ -0.2
Clip4Q8CI96 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.79□□□□□ -0.2
Clip4Q8CI96 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clip4Q8CI96 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.78□□□□□ -0.2
Clip4Q8CI96 Gm15487-201ENSMUST00000122373 465 ntBASIC13.78□□□□□ -0.2
Clip4Q8CI96 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Mir6977-201ENSMUST00000184960 64 ntBASIC13.78□□□□□ -0.2
Clip4Q8CI96 Gm43703-201ENSMUST00000200523 763 ntBASIC13.78□□□□□ -0.2
Clip4Q8CI96 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Clip4Q8CI96 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.78□□□□□ -0.2
Clip4Q8CI96 Gm9229-201ENSMUST00000222777 126 ntBASIC13.78□□□□□ -0.2
Clip4Q8CI96 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip4Q8CI96 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms