Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.2□□□□□ -0.46
ShfQ8CG80 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ShfQ8CG80 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShfQ8CG80 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
ShfQ8CG80 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShfQ8CG80 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ShfQ8CG80 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShfQ8CG80 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ShfQ8CG80 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.2□□□□□ -0.46
ShfQ8CG80 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ShfQ8CG80 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ShfQ8CG80 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
ShfQ8CG80 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.2□□□□□ -0.46
ShfQ8CG80 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ShfQ8CG80 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ShfQ8CG80 Gm5425-201ENSMUST00000214125 459 ntBASIC12.2□□□□□ -0.46
ShfQ8CG80 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
ShfQ8CG80 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
ShfQ8CG80 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShfQ8CG80 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShfQ8CG80 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShfQ8CG80 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShfQ8CG80 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShfQ8CG80 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShfQ8CG80 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
ShfQ8CG80 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.2□□□□□ -0.46
ShfQ8CG80 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShfQ8CG80 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.2□□□□□ -0.46
ShfQ8CG80 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShfQ8CG80 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
ShfQ8CG80 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShfQ8CG80 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ShfQ8CG80 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
ShfQ8CG80 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShfQ8CG80 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
ShfQ8CG80 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.2□□□□□ -0.46
ShfQ8CG80 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
ShfQ8CG80 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.19□□□□□ -0.46
ShfQ8CG80 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
ShfQ8CG80 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
ShfQ8CG80 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.19□□□□□ -0.46
ShfQ8CG80 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
ShfQ8CG80 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Syt7-205ENSMUST00000224135 1557 ntBASIC12.19□□□□□ -0.46
ShfQ8CG80 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.19□□□□□ -0.46
ShfQ8CG80 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
ShfQ8CG80 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.19□□□□□ -0.46
ShfQ8CG80 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.19□□□□□ -0.46
ShfQ8CG80 Mir1897-201ENSMUST00000122581 272 ntBASIC12.19□□□□□ -0.46
ShfQ8CG80 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.19□□□□□ -0.46
ShfQ8CG80 Gm24420-201ENSMUST00000176676 59 ntBASIC12.19□□□□□ -0.46
ShfQ8CG80 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Gm44771-201ENSMUST00000206975 626 ntBASIC12.19□□□□□ -0.46
ShfQ8CG80 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
ShfQ8CG80 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.19□□□□□ -0.46
ShfQ8CG80 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
ShfQ8CG80 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShfQ8CG80 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShfQ8CG80 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShfQ8CG80 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
ShfQ8CG80 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShfQ8CG80 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShfQ8CG80 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
ShfQ8CG80 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ShfQ8CG80 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ShfQ8CG80 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShfQ8CG80 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ShfQ8CG80 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
ShfQ8CG80 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ShfQ8CG80 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ShfQ8CG80 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShfQ8CG80 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms