Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc28bQ8CEG5 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc28bQ8CEG5 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc28bQ8CEG5 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc28bQ8CEG5 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.51□□□□□ -0.25
Ccdc28bQ8CEG5 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc28bQ8CEG5 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc28bQ8CEG5 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc28bQ8CEG5 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc28bQ8CEG5 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc28bQ8CEG5 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc28bQ8CEG5 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc28bQ8CEG5 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc28bQ8CEG5 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc28bQ8CEG5 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc28bQ8CEG5 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc28bQ8CEG5 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc28bQ8CEG5 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.49□□□□□ -0.25
Ccdc28bQ8CEG5 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc28bQ8CEG5 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.49□□□□□ -0.25
Ccdc28bQ8CEG5 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc28bQ8CEG5 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc28bQ8CEG5 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc28bQ8CEG5 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.49□□□□□ -0.25
Ccdc28bQ8CEG5 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.49□□□□□ -0.25
Ccdc28bQ8CEG5 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc28bQ8CEG5 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc28bQ8CEG5 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc28bQ8CEG5 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc28bQ8CEG5 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc28bQ8CEG5 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc28bQ8CEG5 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc28bQ8CEG5 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc28bQ8CEG5 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc28bQ8CEG5 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc28bQ8CEG5 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc28bQ8CEG5 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc28bQ8CEG5 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc28bQ8CEG5 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.49□□□□□ -0.25
Ccdc28bQ8CEG5 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc28bQ8CEG5 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Paupar-201ENSMUST00000194826 3482 ntBASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms