Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Alx1Q8C8B0 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alx1Q8C8B0 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alx1Q8C8B0 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Alx1Q8C8B0 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Alx1Q8C8B0 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alx1Q8C8B0 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Alx1Q8C8B0 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.89■□□□□ 0.13
Alx1Q8C8B0 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alx1Q8C8B0 Gm6244-201ENSMUST00000178732 841 ntBASIC15.89■□□□□ 0.13
Alx1Q8C8B0 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Alx1Q8C8B0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Alx1Q8C8B0 Gm5745-201ENSMUST00000183748 313 ntBASIC15.89■□□□□ 0.13
Alx1Q8C8B0 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.89■□□□□ 0.13
Alx1Q8C8B0 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alx1Q8C8B0 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alx1Q8C8B0 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alx1Q8C8B0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alx1Q8C8B0 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alx1Q8C8B0 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alx1Q8C8B0 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alx1Q8C8B0 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Itm2b-204ENSMUST00000228637 783 ntBASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Gm43273-201ENSMUST00000199649 2594 ntBASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Alx1Q8C8B0 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alx1Q8C8B0 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Gm13612-201ENSMUST00000119276 390 ntBASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alx1Q8C8B0 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Gm27892-201ENSMUST00000185017 106 ntBASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC15.87■□□□□ 0.13
Alx1Q8C8B0 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Gm5035-201ENSMUST00000215581 927 ntBASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Alx1Q8C8B0 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Gm4782-201ENSMUST00000168705 2046 ntBASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alx1Q8C8B0 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Alx1Q8C8B0 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Alx1Q8C8B0 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Alx1Q8C8B0 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Alx1Q8C8B0 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Alx1Q8C8B0 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.86■□□□□ 0.13
Alx1Q8C8B0 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Alx1Q8C8B0 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.86■□□□□ 0.13
Alx1Q8C8B0 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.86■□□□□ 0.13
Alx1Q8C8B0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Alx1Q8C8B0 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Alx1Q8C8B0 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms