Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Aph1bQ8C7N7 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.54□□□□□ -0.24
Aph1bQ8C7N7 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Aph1bQ8C7N7 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.54□□□□□ -0.24
Aph1bQ8C7N7 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Aph1bQ8C7N7 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Aph1bQ8C7N7 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Aph1bQ8C7N7 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Aph1bQ8C7N7 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Aph1bQ8C7N7 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Aph1bQ8C7N7 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Aph1bQ8C7N7 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Aph1bQ8C7N7 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Aph1bQ8C7N7 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Gm15393-201ENSMUST00000120499 219 ntBASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Gm27618-201ENSMUST00000183671 60 ntBASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Gm2756-201ENSMUST00000195851 400 ntBASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Aph1bQ8C7N7 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.52□□□□□ -0.24
Aph1bQ8C7N7 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Aph1bQ8C7N7 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Aph1bQ8C7N7 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Aph1bQ8C7N7 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Aph1bQ8C7N7 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Aph1bQ8C7N7 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Aph1bQ8C7N7 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Aph1bQ8C7N7 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Aph1bQ8C7N7 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Gm6912-201ENSMUST00000117218 544 ntBASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Gm25948-201ENSMUST00000175334 112 ntBASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Gm4804-201ENSMUST00000182234 999 ntBASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Aph1bQ8C7N7 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms