Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Gm2756-201ENSMUST00000195851 400 ntBASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tsen54Q8C2A2 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Gm10154-201ENSMUST00000084445 354 ntBASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms