Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm29667-201ENSMUST00000190817 490 ntBASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Gm4804-201ENSMUST00000182234 999 ntBASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf3Q8C120 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf3Q8C120 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms