Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Gm27772-201ENSMUST00000184900 187 ntBASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Gm15770-201ENSMUST00000117498 584 ntBASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trub1Q8C0D0 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trub1Q8C0D0 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trub1Q8C0D0 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
Trub1Q8C0D0 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trub1Q8C0D0 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Gm15321-201ENSMUST00000121290 288 ntBASIC14.08□□□□□ -0.16
Trub1Q8C0D0 Gm24694-201ENSMUST00000180054 110 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms