Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm7287-201ENSMUST00000205267 602 ntBASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Cdk5rap1Q8BTW8 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm13829-201ENSMUST00000119600 138 ntBASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm42550-201ENSMUST00000201553 960 ntBASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.96□□□□□ -0.33
Cdk5rap1Q8BTW8 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms