Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Rmrp-201ENSMUST00000157463 271 ntBASIC11.29□□□□□ -0.6
Smg1Q8BKX6 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Gm25214-201ENSMUST00000104573 129 ntBASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Gm16397-201ENSMUST00000122201 494 ntBASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Gm9211-201ENSMUST00000182882 975 ntBASIC11.28□□□□□ -0.6
Smg1Q8BKX6 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Gm12363-201ENSMUST00000122250 668 ntBASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smg1Q8BKX6 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smg1Q8BKX6 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smg1Q8BKX6 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smg1Q8BKX6 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smg1Q8BKX6 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smg1Q8BKX6 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Smg1Q8BKX6 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smg1Q8BKX6 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smg1Q8BKX6 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smg1Q8BKX6 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smg1Q8BKX6 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Smg1Q8BKX6 Gm13045-201ENSMUST00000119019 712 ntBASIC11.27□□□□□ -0.6
Smg1Q8BKX6 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.27□□□□□ -0.6
Smg1Q8BKX6 Gm23218-201ENSMUST00000158124 276 ntBASIC11.27□□□□□ -0.6
Smg1Q8BKX6 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.27□□□□□ -0.6
Smg1Q8BKX6 Spcs1-203ENSMUST00000226374 592 ntBASIC11.27□□□□□ -0.6
Smg1Q8BKX6 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smg1Q8BKX6 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Gm43598-201ENSMUST00000202482 2479 ntBASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms