Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.51□□□□□ -0.25
Ubp1Q811S7 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubp1Q811S7 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ubp1Q811S7 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubp1Q811S7 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubp1Q811S7 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubp1Q811S7 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ubp1Q811S7 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ubp1Q811S7 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubp1Q811S7 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubp1Q811S7 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubp1Q811S7 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubp1Q811S7 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubp1Q811S7 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubp1Q811S7 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubp1Q811S7 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubp1Q811S7 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Ubp1Q811S7 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.5□□□□□ -0.25
Ubp1Q811S7 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubp1Q811S7 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubp1Q811S7 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubp1Q811S7 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Ubp1Q811S7 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ubp1Q811S7 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.5□□□□□ -0.25
Ubp1Q811S7 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.5□□□□□ -0.25
Ubp1Q811S7 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ubp1Q811S7 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.5□□□□□ -0.25
Ubp1Q811S7 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ubp1Q811S7 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.5□□□□□ -0.25
Ubp1Q811S7 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.5□□□□□ -0.25
Ubp1Q811S7 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.5□□□□□ -0.25
Ubp1Q811S7 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubp1Q811S7 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ubp1Q811S7 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubp1Q811S7 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubp1Q811S7 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubp1Q811S7 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
Ubp1Q811S7 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Gm22189-201ENSMUST00000103822 86 ntBASIC13.49□□□□□ -0.25
Ubp1Q811S7 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubp1Q811S7 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.49□□□□□ -0.25
Ubp1Q811S7 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Gm18905-201ENSMUST00000205454 928 ntBASIC13.49□□□□□ -0.25
Ubp1Q811S7 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubp1Q811S7 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.49□□□□□ -0.25
Ubp1Q811S7 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubp1Q811S7 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubp1Q811S7 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ubp1Q811S7 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ubp1Q811S7 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.48□□□□□ -0.25
Ubp1Q811S7 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubp1Q811S7 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubp1Q811S7 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubp1Q811S7 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ubp1Q811S7 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.48□□□□□ -0.25
Ubp1Q811S7 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubp1Q811S7 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.48□□□□□ -0.25
Ubp1Q811S7 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ubp1Q811S7 Gm15240-201ENSMUST00000118156 720 ntBASIC13.48□□□□□ -0.25
Ubp1Q811S7 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ubp1Q811S7 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.48□□□□□ -0.25
Ubp1Q811S7 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubp1Q811S7 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ubp1Q811S7 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubp1Q811S7 Gm24420-201ENSMUST00000176676 59 ntBASIC13.48□□□□□ -0.25
Ubp1Q811S7 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubp1Q811S7 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.48□□□□□ -0.25
Ubp1Q811S7 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubp1Q811S7 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms