Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Otop1Q80VM9 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.14□□□□□ -0.31
Otop1Q80VM9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Otop1Q80VM9 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.13□□□□□ -0.31
Otop1Q80VM9 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Gm27243-201ENSMUST00000183964 521 ntBASIC13.13□□□□□ -0.31
Otop1Q80VM9 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.13□□□□□ -0.31
Otop1Q80VM9 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.13□□□□□ -0.31
Otop1Q80VM9 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.13□□□□□ -0.31
Otop1Q80VM9 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.13□□□□□ -0.31
Otop1Q80VM9 Gm38223-201ENSMUST00000194484 695 ntBASIC13.13□□□□□ -0.31
Otop1Q80VM9 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Otop1Q80VM9 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.13□□□□□ -0.31
Otop1Q80VM9 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.13□□□□□ -0.31
Otop1Q80VM9 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Otop1Q80VM9 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Otop1Q80VM9 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otop1Q80VM9 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otop1Q80VM9 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Otop1Q80VM9 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.12□□□□□ -0.31
Otop1Q80VM9 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otop1Q80VM9 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Otop1Q80VM9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otop1Q80VM9 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.12□□□□□ -0.31
Otop1Q80VM9 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Otop1Q80VM9 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Otop1Q80VM9 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Otop1Q80VM9 Gm11803-201ENSMUST00000119966 444 ntBASIC13.12□□□□□ -0.31
Otop1Q80VM9 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.12□□□□□ -0.31
Otop1Q80VM9 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otop1Q80VM9 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Otop1Q80VM9 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.12□□□□□ -0.31
Otop1Q80VM9 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.12□□□□□ -0.31
Otop1Q80VM9 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.12□□□□□ -0.31
Otop1Q80VM9 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otop1Q80VM9 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otop1Q80VM9 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Otop1Q80VM9 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otop1Q80VM9 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otop1Q80VM9 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otop1Q80VM9 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otop1Q80VM9 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Otop1Q80VM9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otop1Q80VM9 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otop1Q80VM9 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Otop1Q80VM9 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.12□□□□□ -0.31
Otop1Q80VM9 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otop1Q80VM9 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.11□□□□□ -0.31
Otop1Q80VM9 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Otop1Q80VM9 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Otop1Q80VM9 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Otop1Q80VM9 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Otop1Q80VM9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms