Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Gm6244-201ENSMUST00000178732 841 ntBASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Gm5035-201ENSMUST00000215581 927 ntBASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh19Q80TF3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Gm12928-201ENSMUST00000117115 573 ntBASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Gm27486-201ENSMUST00000184923 80 ntBASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Gm42550-201ENSMUST00000201553 960 ntBASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Gm5161-201ENSMUST00000075243 853 ntBASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh19Q80TF3 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
Pcdh19Q80TF3 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Gm17150-201ENSMUST00000165577 381 ntBASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Gm27839-201ENSMUST00000184242 106 ntBASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Gm2495-201ENSMUST00000191160 466 ntBASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms