Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Gm12428-201ENSMUST00000119844 727 ntBASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Gm16476-201ENSMUST00000221544 139 ntBASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Otub1Q7TQI3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Otub1Q7TQI3 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Otub1Q7TQI3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13□□□□□ -0.33
Otub1Q7TQI3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Otub1Q7TQI3 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Otub1Q7TQI3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13□□□□□ -0.33
Otub1Q7TQI3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13□□□□□ -0.33
Otub1Q7TQI3 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Otub1Q7TQI3 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Otub1Q7TQI3 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Otub1Q7TQI3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Otub1Q7TQI3 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13□□□□□ -0.33
Otub1Q7TQI3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Otub1Q7TQI3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13□□□□□ -0.33
Otub1Q7TQI3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Otub1Q7TQI3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Otub1Q7TQI3 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13□□□□□ -0.33
Otub1Q7TQI3 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13□□□□□ -0.33
Otub1Q7TQI3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13□□□□□ -0.33
Otub1Q7TQI3 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13□□□□□ -0.33
Otub1Q7TQI3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13□□□□□ -0.33
Otub1Q7TQI3 Shd-206ENSMUST00000225145 998 ntBASIC13□□□□□ -0.33
Otub1Q7TQI3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Otub1Q7TQI3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Otub1Q7TQI3 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Otub1Q7TQI3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13□□□□□ -0.33
Otub1Q7TQI3 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Otub1Q7TQI3 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Otub1Q7TQI3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Otub1Q7TQI3 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Otub1Q7TQI3 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Otub1Q7TQI3 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13□□□□□ -0.33
Otub1Q7TQI3 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Otub1Q7TQI3 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Otub1Q7TQI3 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Otub1Q7TQI3 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13□□□□□ -0.33
Otub1Q7TQI3 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Otub1Q7TQI3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Otub1Q7TQI3 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Otub1Q7TQI3 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Otub1Q7TQI3 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms