Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Topbp1Q6ZQF0 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Topbp1Q6ZQF0 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Topbp1Q6ZQF0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Topbp1Q6ZQF0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Topbp1Q6ZQF0 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Topbp1Q6ZQF0 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC18.83■□□□□ 0.6
Topbp1Q6ZQF0 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC18.83■□□□□ 0.6
Topbp1Q6ZQF0 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Topbp1Q6ZQF0 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC18.83■□□□□ 0.6
Topbp1Q6ZQF0 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Topbp1Q6ZQF0 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC18.83■□□□□ 0.6
Topbp1Q6ZQF0 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Topbp1Q6ZQF0 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Topbp1Q6ZQF0 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Topbp1Q6ZQF0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Topbp1Q6ZQF0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Topbp1Q6ZQF0 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC18.83■□□□□ 0.6
Topbp1Q6ZQF0 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Topbp1Q6ZQF0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 Gm23363-201ENSMUST00000175024 79 ntBASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 Mir7221-201ENSMUST00000184009 72 ntBASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 Gm37201-201ENSMUST00000191845 523 ntBASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 CT009718.3-201ENSMUST00000221116 367 ntBASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 Gm45133-201ENSMUST00000207548 2773 ntBASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Topbp1Q6ZQF0 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Topbp1Q6ZQF0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Topbp1Q6ZQF0 Gm43908-201ENSMUST00000205074 1472 ntBASIC18.81■□□□□ 0.6
Topbp1Q6ZQF0 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Topbp1Q6ZQF0 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC18.81■□□□□ 0.6
Topbp1Q6ZQF0 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC18.81■□□□□ 0.6
Topbp1Q6ZQF0 Gm11331-201ENSMUST00000119764 288 ntBASIC18.81■□□□□ 0.6
Topbp1Q6ZQF0 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC18.81■□□□□ 0.6
Topbp1Q6ZQF0 Gm12201-201ENSMUST00000120657 1234 ntBASIC18.81■□□□□ 0.6
Topbp1Q6ZQF0 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Topbp1Q6ZQF0 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Topbp1Q6ZQF0 Gm8018-201ENSMUST00000173536 789 ntBASIC18.81■□□□□ 0.6
Topbp1Q6ZQF0 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC18.81■□□□□ 0.6
Topbp1Q6ZQF0 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC18.81■□□□□ 0.6
Topbp1Q6ZQF0 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Topbp1Q6ZQF0 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Topbp1Q6ZQF0 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Topbp1Q6ZQF0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Topbp1Q6ZQF0 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Topbp1Q6ZQF0 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Topbp1Q6ZQF0 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Topbp1Q6ZQF0 Gm5466-201ENSMUST00000119395 1890 ntBASIC18.81■□□□□ 0.6
Topbp1Q6ZQF0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Topbp1Q6ZQF0 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Topbp1Q6ZQF0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Topbp1Q6ZQF0 Gm4864-201ENSMUST00000219894 1461 ntBASIC18.8■□□□□ 0.6
Topbp1Q6ZQF0 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Topbp1Q6ZQF0 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC18.8■□□□□ 0.6
Topbp1Q6ZQF0 Gm26361-201ENSMUST00000158868 186 ntBASIC18.8■□□□□ 0.6
Topbp1Q6ZQF0 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC18.8■□□□□ 0.6
Topbp1Q6ZQF0 Gm5904-201ENSMUST00000210286 865 ntBASIC18.8■□□□□ 0.6
Topbp1Q6ZQF0 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC18.8■□□□□ 0.6
Topbp1Q6ZQF0 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC18.8■□□□□ 0.6
Topbp1Q6ZQF0 Gm43697-201ENSMUST00000199637 2581 ntBASIC18.8■□□□□ 0.6
Topbp1Q6ZQF0 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Topbp1Q6ZQF0 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Topbp1Q6ZQF0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Topbp1Q6ZQF0 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Topbp1Q6ZQF0 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Topbp1Q6ZQF0 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Topbp1Q6ZQF0 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Topbp1Q6ZQF0 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Topbp1Q6ZQF0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Topbp1Q6ZQF0 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Topbp1Q6ZQF0 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC18.8■□□□□ 0.6
Topbp1Q6ZQF0 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Topbp1Q6ZQF0 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC18.8■□□□□ 0.6
Topbp1Q6ZQF0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.8■□□□□ 0.6
Topbp1Q6ZQF0 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.8■□□□□ 0.6
Topbp1Q6ZQF0 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Topbp1Q6ZQF0 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Topbp1Q6ZQF0 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms