Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Gm3890-201ENSMUST00000182416 207 ntBASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Mir7070-201ENSMUST00000183657 86 ntBASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Gm6082-201ENSMUST00000215204 454 ntBASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Mettl6-204ENSMUST00000227595 1027 ntBASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx55Q6ZPL9 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx55Q6ZPL9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.46■□□□□ 0.07
Ddx55Q6ZPL9 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx55Q6ZPL9 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx55Q6ZPL9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Ddx55Q6ZPL9 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Ddx55Q6ZPL9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx55Q6ZPL9 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Ddx55Q6ZPL9 Gm6447-201ENSMUST00000118905 835 ntBASIC15.46■□□□□ 0.07
Ddx55Q6ZPL9 Gm16479-201ENSMUST00000121706 932 ntBASIC15.46■□□□□ 0.07
Ddx55Q6ZPL9 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx55Q6ZPL9 Mir5132-201ENSMUST00000175166 71 ntBASIC15.46■□□□□ 0.07
Ddx55Q6ZPL9 Mir3547-201ENSMUST00000175461 88 ntBASIC15.46■□□□□ 0.07
Ddx55Q6ZPL9 Mospd4-201ENSMUST00000180618 576 ntBASIC15.46■□□□□ 0.07
Ddx55Q6ZPL9 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC15.46■□□□□ 0.07
Ddx55Q6ZPL9 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC15.46■□□□□ 0.07
Ddx55Q6ZPL9 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC15.46■□□□□ 0.07
Ddx55Q6ZPL9 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC15.46■□□□□ 0.07
Ddx55Q6ZPL9 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC15.46■□□□□ 0.07
Ddx55Q6ZPL9 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx55Q6ZPL9 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx55Q6ZPL9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Ddx55Q6ZPL9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx55Q6ZPL9 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx55Q6ZPL9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx55Q6ZPL9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ddx55Q6ZPL9 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.46■□□□□ 0.06
Ddx55Q6ZPL9 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ddx55Q6ZPL9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Ddx55Q6ZPL9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Ddx55Q6ZPL9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.46■□□□□ 0.06
Ddx55Q6ZPL9 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.46■□□□□ 0.06
Ddx55Q6ZPL9 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ddx55Q6ZPL9 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ddx55Q6ZPL9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Gm11637-201ENSMUST00000120601 592 ntBASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Gm20482-202ENSMUST00000174729 825 ntBASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx55Q6ZPL9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms