Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Gm13786-201ENSMUST00000122371 333 ntBASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Mir433-201ENSMUST00000093564 124 ntBASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Gm15370-201ENSMUST00000117158 253 ntBASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Gm2991-201ENSMUST00000173338 480 ntBASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Gm8227-201ENSMUST00000223306 571 ntBASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Snrnp40Q6PE01 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Snrnp40Q6PE01 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Snrnp40Q6PE01 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Snrnp40Q6PE01 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Snrnp40Q6PE01 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms