Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd4Q6PDQ2 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC17.5■□□□□ 0.39
Chd4Q6PDQ2 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd4Q6PDQ2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd4Q6PDQ2 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chd4Q6PDQ2 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd4Q6PDQ2 CT009713.10-201ENSMUST00000225013 1986 ntBASIC17.5■□□□□ 0.39
Chd4Q6PDQ2 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd4Q6PDQ2 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd4Q6PDQ2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chd4Q6PDQ2 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd4Q6PDQ2 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC17.5■□□□□ 0.39
Chd4Q6PDQ2 Gm13316-201ENSMUST00000140537 691 ntBASIC17.5■□□□□ 0.39
Chd4Q6PDQ2 Gm6082-201ENSMUST00000215204 454 ntBASIC17.5■□□□□ 0.39
Chd4Q6PDQ2 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd4Q6PDQ2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chd4Q6PDQ2 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd4Q6PDQ2 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC17.5■□□□□ 0.39
Chd4Q6PDQ2 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd4Q6PDQ2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC17.5■□□□□ 0.39
Chd4Q6PDQ2 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC17.5■□□□□ 0.39
Chd4Q6PDQ2 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd4Q6PDQ2 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd4Q6PDQ2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd4Q6PDQ2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Gm11222-201ENSMUST00000119005 738 ntBASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Gm7619-201ENSMUST00000210649 1282 ntBASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Gm43056-201ENSMUST00000197865 2791 ntBASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Gm44775-201ENSMUST00000207266 1456 ntBASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Gm14752-201ENSMUST00000120719 2075 ntBASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Gm21451-201ENSMUST00000111062 2775 ntBASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Gm10434-201ENSMUST00000101158 471 ntBASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chd4Q6PDQ2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd4Q6PDQ2 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd4Q6PDQ2 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd4Q6PDQ2 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Chd4Q6PDQ2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd4Q6PDQ2 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd4Q6PDQ2 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd4Q6PDQ2 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd4Q6PDQ2 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd4Q6PDQ2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Chd4Q6PDQ2 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Chd4Q6PDQ2 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd4Q6PDQ2 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC17.48■□□□□ 0.39
Chd4Q6PDQ2 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd4Q6PDQ2 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC17.48■□□□□ 0.39
Chd4Q6PDQ2 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chd4Q6PDQ2 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC17.48■□□□□ 0.39
Chd4Q6PDQ2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd4Q6PDQ2 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC17.48■□□□□ 0.39
Chd4Q6PDQ2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd4Q6PDQ2 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd4Q6PDQ2 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Chd4Q6PDQ2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd4Q6PDQ2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Gm14704-201ENSMUST00000120300 874 ntBASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms