Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Gm25911-201ENSMUST00000157621 56 ntBASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd3Q6P9Z1 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Gm5566-201ENSMUST00000116118 459 ntBASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Gm37714-201ENSMUST00000194742 342 ntBASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Gm44719-201ENSMUST00000206404 149 ntBASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Gm18041-201ENSMUST00000218210 618 ntBASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd3Q6P9Z1 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd3Q6P9Z1 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd3Q6P9Z1 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Smarcd3Q6P9Z1 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Smarcd3Q6P9Z1 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Smarcd3Q6P9Z1 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd3Q6P9Z1 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd3Q6P9Z1 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd3Q6P9Z1 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.53□□□□□ -0.4
Smarcd3Q6P9Z1 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd3Q6P9Z1 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd3Q6P9Z1 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.53□□□□□ -0.4
Smarcd3Q6P9Z1 Gm9719-201ENSMUST00000162765 543 ntBASIC12.53□□□□□ -0.4
Smarcd3Q6P9Z1 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.53□□□□□ -0.4
Smarcd3Q6P9Z1 Mir6990-201ENSMUST00000183724 91 ntBASIC12.53□□□□□ -0.4
Smarcd3Q6P9Z1 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.53□□□□□ -0.4
Smarcd3Q6P9Z1 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Smarcd3Q6P9Z1 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.53□□□□□ -0.4
Smarcd3Q6P9Z1 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms