Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgb4Q6P8W9 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgb4Q6P8W9 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgb4Q6P8W9 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgb4Q6P8W9 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgb4Q6P8W9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Hmgb4Q6P8W9 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgb4Q6P8W9 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgb4Q6P8W9 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.33□□□□□ -0.12
Hmgb4Q6P8W9 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Hmgb4Q6P8W9 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Gm11425-201ENSMUST00000119608 498 ntBASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Gm9396-201ENSMUST00000076703 567 ntBASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.32□□□□□ -0.12
Hmgb4Q6P8W9 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Gm18905-201ENSMUST00000205454 928 ntBASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Gm44608-201ENSMUST00000206827 855 ntBASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb4Q6P8W9 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms